Vitamin B12 Deficiency in Dogs: Symptoms, Causes, Diet, and Long-Term Management

Vitamin B12, also known as cobalamin, is a water-soluble vitamin essential to numerous physiological functions in dogs. From DNA synthesis and red blood cell formation to maintaining neurological integrity and intestinal health, B12 plays a vital role in your dog’s overall wellbeing.

Unfortunately, B12 deficiency in dogs is underdiagnosed and often misinterpreted due to its vague, systemic symptoms. Left untreated, it can result in serious complications including failure to thrive, gastrointestinal disease, neurological issues, and even immunosuppression.

This in-depth guide explores the causes, symptoms, and diagnosis of B12 deficiency in dogs, alongside practical nutritional strategies and long-term management solutions, backed by peer-reviewed veterinary research.

Why Is Vitamin B12 Important for Dogs?

Vitamin B12 is absorbed in the small intestine—specifically, the ileum—with the help of intrinsic factor (IF), a protein primarily produced in the pancreas in dogs (unlike humans, where it is produced in the stomach). Once absorbed, B12 is transported to cells via carrier proteins (transcobalamins), enabling numerous essential functions:

  • DNA synthesis

  • Red blood cell production

  • Neurological function

  • Fat and carbohydrate metabolism

  • Immune support

  • Enterocyte health (intestinal cell regeneration)

Even subclinical B12 deficiencies (not sever enough to be detected) may impair digestion, nutrient absorption, and overall energy metabolism.

Common Symptoms of B12 Deficiency in Dogs

The signs of cobalamin deficiency are often non-specific and may mimic other gastrointestinal or metabolic disorders. Common symptoms include:

  • Weight loss or failure to gain weight (especially in puppies)

  • Lethargy and weakness

  • Inappetence or fussy eating

  • Chronic diarrhoea or soft stools

  • Flatulence and gut discomfort

  • Intermittent vomiting

  • Unkempt coat or poor hair quality

  • Neurological signs such as incoordination, tremors, or confusion (in severe cases)

  • Low folate levels or concurrent folate imbalance

In puppies or young dogs with genetic malabsorption issues, growth may be significantly stunted. Chronic low B12 can also compromise immune function, leaving dogs more vulnerable to infections.

Causes of Vitamin B12 Deficiency in Dogs

B12 deficiency may arise from multiple causes, ranging from genetic disorders to chronic diseases or dietary inadequacies:

1. Genetic Conditions (e.g. Imerslund-Gräsbeck Syndrome)

Certain breeds such as Border Collies, Beagles, and Giant Schnauzers have inherited defects in the cubam receptor, which is responsible for B12 absorption in the ileum. Affected dogs cannot absorb B12 efficiently, regardless of dietary intake. In such cases many dogs will respond to B12 injections.

📘 Study: Kook PH, et al. (2012). “Evaluation of serum cobalamin, folate, and methylmalonic acid concentrations in Border Collies with presumed hereditary cobalamin malabsorption.” J Vet Intern Med. 26(2):304–10. doi:10.1111/j.1939-1676.2012.00982.x

2. Exocrine Pancreatic Insufficiency (EPI)

The pancreas is responsible for secreting intrinsic factor (IF) in dogs. In dogs with EPI, lack of IF means that B12 absorption is significantly impaired.

📘 Study: Batt RM, et al. (1991). “Intestinal and hepatic changes associated with canine exocrine pancreatic insufficiency.” Res Vet Sci. 51(2):180–7.

3. Chronic Inflammatory Bowel Disease (IBD)

Inflammation of the ileum through many factors disrupts the absorptive capacity for B12. Dogs with IBD often have concurrent dysbiosis and low serum cobalamin.

4. Small Intestinal Bacterial Overgrowth (SIBO)

Excess bacteria in the small intestine can compete for B12, leading to functional deficiency. This can usually be detected with high folate levels but not always.

5. Liver Disease

B12 is stored in the liver. Chronic liver dysfunction may lower cobalamin reserves, especially in combination with poor intake or absorption.

6. Poor Diet or Malnutrition

While rare in dogs fed complete and balanced commercial diets, prolonged feeding of unbalanced home-prepared meals, vegan diets, or poor-quality raw food without supplementation can cause B12 deficiency.

7. Gastrointestinal Neoplasia or Surgery

Tumours or surgical removal of the ileum (such as in cancer cases) may directly impact absorption.

Diagnosing B12 Deficiency in Dogs

Veterinary diagnosis typically involves:

  • Serum cobalamin levels (dogs should ideally be ≥350 ng/L)

  • Methylmalonic acid (MMA) – elevated in cellular B12 deficiency

  • Folate testing – helps distinguish between small intestinal dysbiosis or malabsorption

  • Pancreatic function tests – to rule out EPI or Pancreatitis

  • Clinical signs and history – breed, diet, symptoms

Important: A dog may have normal serum B12 but still experience functional deficiency at the cellular level. That’s why MMA testing is increasingly recommended.

📘 Study: Toresson L, Steiner JM, et al. (2015). “Comparison of two cobalamin supplementation protocols in dogs with low cobalamin concentrations.” J Vet Intern Med. 30(3): 678–682. DOI:10.1111/jvim.13928

Dietary Management of B12 Deficiency

Managing B12 deficiency involves addressing both the underlying cause and nutritional rehabilitation. Here’s how:

1. Supplementation

Cobalamin can be supplemented in two main ways:

  • Parenterally (injections): Typically, 250–1,000µg given subcutaneously weekly for 4–6 weeks, followed by monthly maintenance.

  • Orally: High-dose oral cyanocobalamin (e.g., 250–500µg/day) can be effective, even in dogs with absorption issues, due to passive diffusion.

Methylcobalamin is the active form and may be more bioavailable, especially in dogs with methylation impairments, though data in dogs is currently limited and more studies need to be carried out.

2. Dietary Support

Dogs with B12 deficiency benefit from a highly digestible, nutrient-rich, low-residue diet. This includes:

  • Easily digestible proteins (e.g., turkey, white fish, chicken)

  • Low to moderate fat content (if GI or pancreatic issues present)

  • Soluble fibre sources (e.g., pumpkin, psyllium) for gut health

  • Prebiotics and probiotics to restore microbiome balance

Foods to Avoid

When managing a dog with B12 deficiency or GI illness, avoid:

  • Unbalanced homemade diets lacking supplements

  • Grain-free, high-legume kibble – may worsen GI signs or inflammation in some dogs

  • Vegan or vegetarian diets – no natural B12

  • Raw bones or overly fatty meats – hard to digest for dogs with EPI or GI disease

  • High-fibre raw vegetables – may irritate the gut

Long-Term Management & Monitoring

B12 deficiency is often secondary, so long-term care includes:

  • Monitoring cobalamin levels every 3–6 months with your vet

  • Routine deworming and gut support (e.g., probiotics like Enterococcus faecium)

  • Ongoing dietary support with a complete and balanced, GI-friendly diet

  • Addressing the primary disease, whether that be IBD, EPI, or genetic malabsorption

Chronic cases may require lifelong supplementation, particularly in dogs with genetic defects.

Case Study: Giant Schnauzer with Imerslund-Gräsbeck Syndrome

A 6-month-old Giant Schnauzer was referred to a specialist centre with lethargy, failure to thrive, and diarrhoea. Serum cobalamin was 110 ng/L. Genetic testing confirmed a cubam receptor mutation. After weekly B12 injections for 6 weeks, followed by monthly maintenance, the dog’s energy, weight, and stool quality improved dramatically.

📘 Reference: Fyfe JC, et al. (2004). “Inheritance of selective intestinal cobalamin malabsorption in Giant Schnauzers.” J Vet Intern Med. 18(4):463–6.

Peer-Reviewed References and Further Reading

  1. Toresson L, Steiner JM, et al. (2015). Comparison of two cobalamin supplementation protocols in dogs with low cobalamin concentrations. JVIM, 30(3):678–82.

  2. Kook PH, et al. (2012). Evaluation of serum cobalamin, folate, and methylmalonic acid in Border Collies. JVIM, 26(2):304–10.

  3. Fyfe JC, et al. (2004). Inheritance of selective intestinal cobalamin malabsorption in Giant Schnauzers. JVIM, 18(4):463–6.

  4. Batt RM, et al. (1991). Intestinal and hepatic changes associated with canine exocrine pancreatic insufficiency. Res Vet Sci., 51(2):180–7.

  5. Simpson KW, et al. (2001). Cobalamin absorption and deficiency in dogs. Vet Clin North Am Small Anim Pract. 31(5):1019–35.

Final Thoughts

Vitamin B12 deficiency in dogs is a multifaceted condition that often signals a deeper gastrointestinal or metabolic issue. Whether it’s due to genetic malabsorption, pancreatic disease, or poor diet, recognising the signs early and implementing a targeted treatment plan can vastly improve a dog’s health and quality of life.

If your dog has been diagnosed with B12 deficiency—or you suspect something isn’t right—consult a vet and work alongside a qualified canine nutritionist to ensure your dog’s diet supports their recovery and long-term wellbeing.

Need Help With a B12-Friendly Diet Plan?


The Canine Dietitian offers one-on-one consults and tailored nutrition plans to support dogs with chronic GI conditions. Join The Canine Code for exclusive recipes, gut health tips, and supplement guidance tailored to your dog.

If you need personalised advice regarding your dog’s diet or health, feel free to reach out to The Canine Dietitian at www.thecaninedietitian.co.uk. Or click here for a FREE diet assessment. We’re here to help ensure your dog gets the best nutrition possible!

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